Access form for large-scale projects Language English Project Title * If your project is funded through a competitive grant, please indicate Project Code, Funding Agency and Call If the requested sequencing activities are within the framework of consortia such as EU projects or ICGC, please indicate which one Principal Investigator Name and surname * ID Card * Position * - Select -Department Director or equivalentGroup/Team LeaderStaff Scientist/PostDocOther Please specify Email address * Institution Name * Department, Group or Service * Post Code * City * Country * - Select -AfghanistanAland IslandsAlbaniaAlgeriaAmerican SamoaAndorraAngolaAnguillaAntarcticaAntigua and BarbudaArgentinaArmeniaArubaAustraliaAustriaAzerbaijanBahamasBahrainBangladeshBarbadosBelarusBelgiumBelizeBeninBermudaBhutanBoliviaBonaire, Sint Eustatius and SabaBosnia and HerzegovinaBotswanaBouvet IslandBrazilBritish Indian Ocean TerritoryBritish Virgin IslandsBruneiBulgariaBurkina FasoBurundiCambodiaCameroonCanadaCape VerdeCayman IslandsCentral African RepublicChadChileChinaChristmas IslandCocos (Keeling) IslandsColombiaComorosCongo (Brazzaville)Congo (Kinshasa)Cook IslandsCosta RicaCroatiaCubaCuraçaoCyprusCzech RepublicDenmarkDjiboutiDominicaDominican RepublicEcuadorEgyptEl SalvadorEquatorial GuineaEritreaEstoniaEthiopiaFalkland IslandsFaroe IslandsFijiFinlandFranceFrench GuianaFrench PolynesiaFrench Southern TerritoriesGabonGambiaGeorgiaGermanyGhanaGibraltarGreeceGreenlandGrenadaGuadeloupeGuamGuatemalaGuernseyGuineaGuinea-BissauGuyanaHaitiHeard Island and McDonald IslandsHondurasHong Kong S.A.R., ChinaHungaryIcelandIndiaIndonesiaIranIraqIrelandIsle of ManIsraelItalyIvory CoastJamaicaJapanJerseyJordanKazakhstanKenyaKiribatiKuwaitKyrgyzstanLaosLatviaLebanonLesothoLiberiaLibyaLiechtensteinLithuaniaLuxembourgMacao S.A.R., ChinaMacedoniaMadagascarMalawiMalaysiaMaldivesMaliMaltaMarshall IslandsMartiniqueMauritaniaMauritiusMayotteMexicoMicronesiaMoldovaMonacoMongoliaMontenegroMontserratMoroccoMozambiqueMyanmarNamibiaNauruNepalNetherlandsNetherlands AntillesNew CaledoniaNew ZealandNicaraguaNigerNigeriaNiueNorfolk IslandNorthern Mariana IslandsNorth KoreaNorwayOmanPakistanPalauPalestinian TerritoryPanamaPapua New GuineaParaguayPeruPhilippinesPitcairnPolandPortugalPuerto RicoQatarReunionRomaniaRussiaRwandaSaint BarthélemySaint HelenaSaint Kitts and NevisSaint LuciaSaint Martin (French part)Saint Pierre and MiquelonSaint Vincent and the GrenadinesSamoaSan MarinoSao Tome and PrincipeSaudi ArabiaSenegalSerbiaSeychellesSierra LeoneSingaporeSint Maarten (Dutch part)SlovakiaSloveniaSolomon IslandsSomaliaSouth AfricaSouth Georgia and the South Sandwich IslandsSouth KoreaSouth SudanSpainSri LankaSudanSurinameSvalbard and Jan MayenSwazilandSwedenSwitzerlandSyriaTaiwanTajikistanTanzaniaThailandTimor-LesteTogoTokelauTongaTrinidad and TobagoTunisiaTurkeyTurkmenistanTurks and Caicos IslandsTuvaluU.S. Virgin IslandsUgandaUkraineUnited Arab EmiratesUnited KingdomUnited StatesUnited States Minor Outlying IslandsUruguayUzbekistanVanuatuVaticanVenezuelaVietnamWallis and FutunaWestern SaharaYemenZambiaZimbabwe Publications Five most relevant publications, preferentially as last author, by the applicant in the field * Description of the project Brief introduction (150 words maximum) * Objectives of the project (150 words maximum) * Experimental design: description of the sequencing activities required (200 words maximum) * Indicate: Number and description of the samples (patients/families, tumor/control, affected/unaffected, treated/non-treated, groups and time points, biological replicates if any,…). Sequencing application (Exome-Seq, WG-Seq, RNA-Seq, Single Cell RNA-Seq…) Sequencing depth per sample (Gb, coverage and million reads) Samples Type: gDNA total RNA mRNA Cell Prepared library All Others Sources: Blood Saliva Hair Biopsy Others Quality: Good quality Some smear Bad quality Amounts available: <0.5ug 0.5-1ug 1-3ug 3-6ug 6-10ug >10ug Description of the bioinformatic analysis activities to be done by CNAG-CRG Germline variants analysis Somatic mutations analysis Transcript quantification/Differential gene expression/Alternative splicing Methylome analysis De novo assembly and annotation Others None If others please describe below (150 max.) The researcher * agrees to be the principal investigator of the submitted project, as it is described in the present application, and confirms that: The samples were obtained with the corresponding approval of the Bioethics Committee and signed "informed consent from each donor, both for collection and for their use, including conservation and manipulation/sequencing by entities such as CNAG-CRG. Research Agree * I agree
